Function that plots the predation mortality at age (M2) by predator as estimated from Rceattle. Returns and saves a figure with the M-at-age trajectory.
Usage
plot_m2_at_age_prop(
Rceattle,
file = NULL,
age = 1,
model_names = NULL,
line_col = NULL,
spnames = NULL,
species = NULL,
lwd = 3,
right_adj = 0,
top_adj = 0.15,
minyr = NULL,
width = 7,
height = 6.5,
incl_proj = FALSE,
incl_mean = FALSE,
add_ci = FALSE
)Arguments
- Rceattle
Single or list of Rceattle model objects exported from
Rceattle- file
name of a file to identified the files exported by the function.
- age
Age to plot M at age
- model_names
Names of models to be used in legend
- line_col
Colors of models to be used for line color
- spnames
Species names for legend
- species
Which species to plot e.g. c(1,4). Default = NULL plots them all
- lwd
Line width as specified by user
- right_adj
Multiplier for to add to the right side of the figure for fitting the legend.
- top_adj
Adjustment for top margin
- minyr
first year to plot
- width
Figure width in inches
- height
Figure height in inches
- incl_proj
TRUE/FALSE include projections years
- incl_mean
TRUE/FALSE include time series mean as horizontal line
- add_ci
TRUE/FALSE, includes 95 percent confidence interval