Landings fits — plot_catch • Rceattle

Plot of fitted landings data on natural-scale (r4ss-style)

Usage

plot_catch(
  Rceattle,
  file = NULL,
  model_names = NULL,
  line_col = NULL,
  species = NULL,
  right_adj = 0,
  top_adj = 1.2,
  incl_proj = FALSE,
  single.plots = FALSE,
  width = NULL,
  height = NULL,
  alpha = 0.4,
  lwd = 2,
  ymax = NULL,
  maxyr = NULL,
  mse = FALSE,
  error = TRUE,
  fleets = NULL
)

Arguments

Rceattle: Single or list of Rceattle model objects exported from Rceattle
file: name of a file to identified the files exported by the function.
model_names: Names of models to be used in legend
line_col: Colors of models to be used for line color
species: Species names for legend
right_adj: How much right side of the x-axis for fitting the legend. As percentage.
top_adj: How much top side of the y-axis for fitting the legend. As percentage (default = 1.2).
incl_proj: TRUE/FALSE include projections years
single.plots: if TRUE plot invidual fits else make multiplot
width: plot width
height: plot hight
alpha: Transparency of lines for MSE plots
lwd: Line width
ymax: Fleet specific upper ylim
maxyr: Max year to plot
mse: Is if an MSE object from load_mse or run_mse. Will plot data from OMs.
error: Include observed data with error bars?
fleets: Which fishing fleets to include (defaults to all = NULL)