Plot biomass consumed of each prey species by predator

Function that plots the biomass consumed trends as estimated from Rceattle. Returns and saves a figure with the biomass eaten trajectory.

Usage

plot_b_eaten_prop(
  Rceattle,
  file = NULL,
  model_names = NULL,
  line_col = NULL,
  spnames = NULL,
  species = NULL,
  lwd = 3,
  right_adj = 0,
  top_adj = 0.15,
  minyr = NULL,
  mohns = NULL,
  width = 7,
  height = 6.5,
  incl_proj = FALSE,
  incl_mean = FALSE,
  add_ci = FALSE,
  mod_cex = 1
)

Arguments

Rceattle

Single or list of Rceattle model objects exported from Rceattle

file

name of a file to identified the files exported by the function.

model_names

Names of models to be used in legend

line_col

Colors of models to be used for line color

spnames

Species names for legend

species

Which species to plot e.g. c(1,4). Default = NULL plots them all

lwd

Line width as specified by user

right_adj

Multiplier for to add to the right side of the figure for fitting the legend.

top_adj

Adjustment for top margin

minyr

first year to plot

mohns

data.frame of mohn's rows extracted from retrospective

width

Figure width in inches

height

Figure height in inches

incl_proj

TRUE/FALSE include projections years

incl_mean

TRUE/FALSE include horizontal long term mean

add_ci

TRUE/FALSE, includes 95 percent confidence interval

mod_cex

Cex of text for model name legend